rs32602925 SNP Detail

Summary

• ID
  rs32602925
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:96286304 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGTTCTGCC CAGCATCCTT
  CTGCTTGTTG GACTTAGTGG ACATTCTTTG CCCTTGGGAG TAGGAGTGGG GCCATTCAGC
  ATAGGTATGT ATAGAAAACG AATTCGTTGT CAGGGCAATA TTTGATTCGT GAAAGGGGAG
  CTCAAAGACC AACTTCTCCC AGAGGTGGAG CGAGGACAGG GAAGGGCCAG CCTTCCTCGT
  S
  TTGGCCGTGA TCCAGTCGCT GTAGTCTGCC ACACTGGTGT ACAGAAACAG GCCAGGGCAC
  GAGTCGCCTC CATAGGCCAG GAGTCCTCTC AGGATCCAGA GATCCAGCTT CTTTGCCTGG
  CACATCATAG GGCTTCCTGG TTCCCCCTGC AGTAAAGGAC AGAATAAGGC TTCAGGTCTC
  AGAAAGACTT CCTTCTCAGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46166612	mCV23402334	ABI	CRAMUS_MOUSE	f	SNP		G				C	C
ss60650952	NES16266217	PERLEGEN	MM_PANEL2	f	SNP	C	G	G	C	C			C	C	C	C	G	C	C
ss145644667	ENSMUSSNP3321347	ENSEMBL	ENSEMBL_Sanger	f	SNP		G					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32602925					SNP	C	G	G	C	C	C	C	C	C	C	C	G	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60650952	NES16266217	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:96286304 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ccdc113	coiled-coil domain containing 113			786 bp downstream
Prss54	serine protease 54			Coding-NonSynonymous
				Noncoding-Transcript-Variant