rs32603000 SNP Detail

Summary

• ID
  rs32603000
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:91862303 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTAG CCCGCTCCCA CCTAGTTCTT
  K
  CGTGTCGCTC TCACTTTGAC CTGAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46166152	mCV23191275	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	T
ss145564063	ENSMUSSNP7204654	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		T
ss322789586	CHEV_8_93659574	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32603000					SNP	T	G	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:91862303 () rs orientation: forward

Symbol	Name	Function Class
Aktip	AKT interacting protein	181 bp upstream
Cpgi20808	CpG island 20808	1195 bp distal
Gm63829	predicted gene, 63829	within coordinates
Rr368579	regulatory region 368579	1292 bp downstream
Rr667489	regulatory region 667489	1689 bp distal
Rr667490	regulatory region 667490	720 bp distal
Rr667491	regulatory region 667491	within coordinates
Rr667492	regulatory region 667492	7 bp proximal
Tssr82405	transcription start site region 82405	1653 bp upstream
Tssr82406	transcription start site region 82406	1637 bp upstream
Tssr82407	transcription start site region 82407	7 bp upstream
Tssr82408	transcription start site region 82408	12 bp downstream
Tssr82409	transcription start site region 82409	27 bp downstream