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rs32603975 SNP Detail
Summary
  • ID
    rs32603975
  • Variation Type
    SNP
  • Alleles
    G/T
Genome Location and Flanking Sequence
  • Location
    Chr1:159442297 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                      ATACAGTGC ATTTAAAGag gaagaaagaa
    agaaagaaag aaagaaagag agTCCTATTT CCATTAAACA TTTATCAAAT GCTTATAGCC
    AAAAAAGCAA AACAACAACA AAACCCTAGA GACTTGGGGG TGGGGGTGCA GGCATAAACA
    K
    CCGCGCCATT GTTCCCATCT TGAGACACTC ACAATCTAGT TAGGGATGGT GACAGCTGAG
    CCAGAGCTGT GCAGCGAGGC AGAGTACGAT GCGTGTCACG AAGGAGTTAC AACAGCTCAG
    CAGCGAGAAG GAAAATGGAA TTCTGATTGG                                 
    
    K = G/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
ss45169198 mCV22713755 ABI CRAMUS_MOUSE f SNP T G T
ss145869405 ENSMUSSNP4066718 ENSEMBL ENSEMBL_Sanger f SNP T G G
ss320078207 CHEV_1_161544858 CHEVERUD SCREENING_POP f SNP T G
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
rs32603975 SNP T G T G T G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr1:159442297 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm10530 predicted gene 10530 22 bp upstream
Rr421549 regulatory region 421549 within coordinates
Rr421550 regulatory region 421550 33 bp proximal
Tnr tenascin R Intron
mRNA-UTR

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory