ATACAGTGC ATTTAAAGag gaagaaagaa agaaagaaag aaagaaagag agTCCTATTT CCATTAAACA TTTATCAAAT GCTTATAGCC AAAAAAGCAA AACAACAACA AAACCCTAGA GACTTGGGGG TGGGGGTGCA GGCATAAACA K CCGCGCCATT GTTCCCATCT TGAGACACTC ACAATCTAGT TAGGGATGGT GACAGCTGAG CCAGAGCTGT GCAGCGAGGC AGAGTACGAT GCGTGTCACG AAGGAGTTAC AACAGCTCAG CAGCGAGAAG GAAAATGGAA TTCTGATTGG K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss45169198 | mCV22713755 | ABI | CRAMUS_MOUSE | f | SNP | T | G | T | |||
ss145869405 | ENSMUSSNP4066718 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | G | G | |||
ss320078207 | CHEV_1_161544858 | CHEVERUD | SCREENING_POP | f | SNP | T | G | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs32603975 | SNP | T | G | T | G | T | G |
Location: Chr1:159442297 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm10530 | predicted gene 10530 | 22 bp upstream | ||||||
Rr421549 | regulatory region 421549 | within coordinates | ||||||
Rr421550 | regulatory region 421550 | 33 bp proximal | ||||||
Tnr | tenascin R | Intron | ||||||
mRNA-UTR |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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