rs32606486 SNP Detail

Summary

• ID
  rs32606486
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:4298060 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGACGCTTG AGAATAAAAC
  CCTTCCCTTT TCTTCCGAGT CTGGTGTCCT AAGCCTGGTA GAGTGTACAG AGATATGGGA
  AGGGCCTGGG AGGAGGGCTT TTAGTGTGGT TAGGGATGAC ATTCATGGGA AACTAGCCGG
  GCCGGGAGCT GGGTGGGAGG TGTTTGGAGT GACCGAAGGC ATCAGGCAGC TTTGTGAGGG
  S
  CCCCCCTTGT AGAAATTTCA GTACATCAAG AAAGCCCTTA TCCATGGCTG GCCTTGAGCA
  TGTGCTCAGA TGTCAGCCCC TCCATCCTCC GCCCCCGCTC CCTGCTTCCC AGGGTGGCAG
  CCTCACCAAG GCCAGGGCTA CCTACCCACA CCTAGAGGGC TGGGTACAGC CCAGCCAGGT
  GCTCGCTGCC GGTCTGGAGC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46166764	mCV23274630	ABI	CRAMUS_MOUSE	f	SNP	C	G	G	G
ss148556223	ENSMUSSNP4321645	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32606486					SNP	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:4298060 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20049	CpG island 20049	1207 bp proximal
Gm49320	predicted gene, 49320	within coordinates
Gm63796	predicted gene, 63796	within coordinates
Map2k7	mitogen-activated protein kinase kinase 7	163 bp downstream
Tgfbr3l	transforming growth factor, beta receptor III-like	154 bp upstream
Tssr76110	transcription start site region 76110	128 bp upstream
Tssr76111	transcription start site region 76111	163 bp upstream
Tssr76112	transcription start site region 76112	188 bp upstream
Tssr76113	transcription start site region 76113	1397 bp upstream