rs32607018 SNP Detail

Summary

• ID
  rs32607018
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:33606866 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGATAATGG GGCTTGCAGC
  CAAGGTTGTC AACATGAGTT TTATTCCTGG GGCCCACCTG GTGAGAGAAG AGAACCAGCT
  CCCATAAGCT GTCTTCTGGG CTTGTCGTCG CTTCCCTTCC CACCTACAAA TGTAAGTATA
  TAAAAACTAG TTAATATGTT AATATAAATG AGGCCTAGCT TATAGTCCCA GCAATCCACG
  R
  ACAGAGGTGA AGCCCATGGG TCTACATAGC AAGTTCTAGG CCAGTGGCGG TTACATGGTT
  TTATACACAC ACACACACAC ACACACACAC ACACACACAC ACACACACAC ACGTGTATGC
  GCATGTGCGT GTAAAATATA GTTATATTTA ATTTGTCTTT TAGCATTTGC ATGCCTTCAA
  AATTTATGAA AAATTAGCTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss48187796	NES12108937	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32607018					SNP	A	A	A	A	A	A	A	A	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48187796	NES12108937	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:33606866 () rs orientation: forward

Symbol	Name	Function Class
Gm15657	predicted gene 15657	within coordinates
Gm15658	predicted gene 15658	within coordinates
Rr326609	regulatory region 326609	within coordinates
Tssr140846	transcription start site region 140846	472 bp downstream
Tssr140847	transcription start site region 140847	608 bp downstream
Tssr140848	transcription start site region 140848	670 bp downstream