rs32611364 SNP Detail

Summary

• ID
  rs32611364
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44388892 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTCAGGTT CAGTCGCCAG
  CAATACAAAC AAGCCACTCT CAGAACTCTG AAAGGATGAG ATACCGGCCT TTCTAAACCC
  TTGGCTTTTG CTCCCCGCAG GCTTCTGCAA AGAGAGTCCC AGCCTTGCCA GGAGGCGGAA
  GTGACTGAGC TGCTAGATCC TTCAAAGTGG AGACATCCAG AAGACAGACA ACTTGGCCAG
  M
  GGGAAATGAA GGTGAAGAGA AACTGAGGAG ATTGGAATCT AGTGCTGAAT TTGCATTCGA
  TGCCGAGCCT AGGAGGTCAG AGAAGACCTA GGGCACAAAA GAGGAAGTAG CAAAGGGGAG
  GTTCTTCCTT CTGATCCCCT CTATTAGGTG GAGGACCTCG GAGGAGAGAC CTCCGCCTTC
  TGCTCTGTAG CGCTGCACTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47688660	NES11326818	PERLEGEN	MM_PANEL2	f	SNP	A	C	C	C	C	C	C	C	C	C	A	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32611364					SNP	A	C	C	C	C	C	C	C	C	C	A	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47688660	NES11326818	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44388892 () rs orientation: forward

Symbol	Name	Function Class
C030014I23Rik	RIKEN cDNA C030014I23 gene	within coordinates
Cpgi21659	CpG island 21659	845 bp proximal
Cpgi21660	CpG island 21660	1561 bp proximal
Gm10023	predicted gene 10023	329 bp downstream
Gm22540	predicted gene, 22540	1080 bp upstream
Gm47204	predicted gene, 47204	within coordinates
Rr677664	regulatory region 677664	1445 bp distal
Rr677665	regulatory region 677665	within coordinates
Rr677666	regulatory region 677666	378 bp proximal
Rr677667	regulatory region 677667	875 bp proximal
Rr677668	regulatory region 677668	1767 bp proximal