rs32611887 SNP Detail

Summary

• ID
  rs32611887
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:156572523 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    acatcttct taactcagtt tctctctagc
  cagaggctaa aactgtctac aaccattcca gtctccattc agcttaaaga ggtgtgactg
  agggatgtca gaatggaaca ggaatttata gtggctaata tattaactct tacagctttt
  K
  taagtgcaaa accaattgtt ttgggggtct cccttctgga aactttggag gctccttgca
  agtgaggtgt tcaggcttaa gtaccctttc ttacctttgt gtaaagtcta cctTCACCCA
  AGACCCACCA CTCCTCTCCT CTCCCCTTCC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45169550	mCV24597244	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	G
ss145803940	ENSMUSSNP6998521	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		G
ss320072658	CHEV_1_158675084	CHEVERUD	SCREENING_POP	f	SNP					T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32611887					SNP	T	G	G	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156572523 () rs orientation: forward

Symbol	Name	Function Class
Gm39683	predicted gene, 39683	within coordinates
Gm69913	predicted gene, 69913	within coordinates
Rr421238	regulatory region 421238	687 bp distal
Rr421239	regulatory region 421239	464 bp distal
Rr421240	regulatory region 421240	within coordinates
Rr421241	regulatory region 421241	271 bp proximal