rs32612304 SNP Detail

Summary

• ID
  rs32612304
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:35971019 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTCCCTAG ACAGCCCACC
  TGGCCTCCCT GACTCTCTGG GTCCCTCCCC CTAGCACACT GAGGCCTGCA CTATGCCATC
  CCACCCAGGA CCTCAAGCTC AAGAAACCAT GTTTGTACCA TGTCTGTCTT CCCTTACAGG
  TCTGAAATTC CTGCCTCCCC CTATACCTCA GCACCCGTGC ACCTTGTTGG CCACATAGCT
  R
  TCCCTCTTTC TTTGAAGTAA AGAAGAGTCT AGAACTCAGC CAGGTGTGGG GAATCCCCCA
  GCAGAGCTTC ACACCCACTG TCCTTCTTAA TCTCCTGACC TCAGCCAGAT AGCAGACCTT
  GGTTGGCATG GTAACCTAAC CTTGTCTCAC CAAGTTGACT CTGTGGGCTC AGGTGGGGGC
  ATCTTGGAAC TGTCTCTGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47688599	NES10233384	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32612304					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47688599	NES10233384	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:35971019 () rs orientation: forward

Symbol	Name	Function Class
Ablim2	actin-binding LIM protein 2	within coordinates
Tssr45961	transcription start site region 45961	681 bp upstream
Tssr45962	transcription start site region 45962	700 bp upstream
Tssr45963	transcription start site region 45963	749 bp upstream
Tssr45964	transcription start site region 45964	780 bp upstream