rs32613780 SNP Detail

Summary

• ID
  rs32613780
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44476123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTAGCCGGG GGTGCAGTTC
  CATGATGGAG CACTTGCCTA GAGTTCAGGA GACCCCTTTG TTTCCCAATA GTAGAGGAAA
  AGAAGAGGAG AAATTGAGGA ATATTCTTCA GAGCTACCAC CAAATTCAAA TGAATGTATG
  AGGAGCGAAG ATTTAGACTT TCAAGTTTCC AACTAGAGCC ATTTCTATAC TGTTATAGAC
  K
  CATATGCACA TGACACAGCT GGACTCCCAC CCCAGACTCA CATTCATATT GATACTACTA
  CCAATGTTAT AACCCACTTT CTCTCTTCCC ATCTCCCGCT TTGCGGTGCT GGGTATCAAA
  CCCAGTGCCT CATACGTGAA GCACAACCCT AGCCGATGAG CTACACCCCA AGACTTTTTT
  TTTTTTAGTC TTAGAGAATT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47689066	NES11321843	PERLEGEN	MM_PANEL2	f	SNP	T	G	G	G	G	G	G	G	T	T	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32613780					SNP	T	G	G	G	G	G	G	G	T	T	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47689066	NES11321843	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44476123 () rs orientation: forward

Symbol	Name	Function Class
Rr195037	regulatory region 195037	478 bp proximal
Rr206319	regulatory region 206319	677 bp proximal