rs32615410 SNP Detail

Summary

• ID
  rs32615410
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:44477786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGGCTCTG CCTGAGGCTA
  TCAGCATGTT TCTCTGAAAA TACCTAGGAA ACAACTGCCG TGTATAGTAA CCTTATATAA
  ATTAAATGAG TGTTGATCCA ACGGACAAAT TTTAGATGCA AAGGAAGAGC TTAAAATGGC
  AACTTCAGGT GGTGATCTGT TTACCACCAG GAAACTCAAA TATCACACTG TCTGTATAAC
  R
  CTAGGCGTTC ATTGGCGTTA GCAAGGAGCC TTGGCTGAAG GTTGCACACC TTTGTAACGC
  TCTTGCAGAG CAAATGGGAA GAGAGGAGAC GAGAAAAGTG ATGTCAAACA CCACTGTGAA
  ATTAGAAACT GACCAAAAAA AATGTCAATT TACAAAAATA ACATCAATTC CAACAGTCAA
  ACTAGAGAGC AAACTTTACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47689088	NES11321688	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32615410					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47689088	NES11321688	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:44477786 () rs orientation: forward

Symbol	Name	Function Class
Rr195037	regulatory region 195037	986 bp distal
Rr206319	regulatory region 206319	585 bp distal
Tssr2844	transcription start site region 2844	1296 bp downstream
Tssr89174	transcription start site region 89174	1225 bp downstream
Tssr89175	transcription start site region 89175	1274 bp downstream
Tssr89176	transcription start site region 89176	1620 bp downstream