rs32618198 SNP Detail

Summary

• ID
  rs32618198
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180549509 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACCCTGTACG TGTTCTCTAG GCCTTTTAGG AAACGTGGTG TTGTTCCTTT GGCCACATAC
  ATGCAAATCT ACAAGAAGGG TGATATTGTA GACATCAATG GGCACTGTTC AAAAAGGAAT
  GTCCCATAAG TGCTACCACA GCAAAACCAG AAGAGTCTAC AATGTCACCC AGCATGCCGT
  GGGCATCATT GCAAACAAGC AGGTTAAGGA CAAAATTCTG GCCAAGAGGA TCAATGTGCG
  GATTGAGCAC ATCAAGCACT CAAAGAGCAG GGACAGCTTC CTGAAGCGGG TGAAGGAGAA
  Y
  GATCAGAAGA AAAAGGAAGC CAAAGAGAAG GGCACCTGGG TGCAGCTGAA GCGCCAGCCT
  GCGCCACCCA GAGAAGCACA CTTTGTGAGG ACTAACAAAA AAGAGCCGGA GCTGCTGGAG
  CCCATTCCAT ACGAATTCAT GGCCTAATGT ACAAAAAAAG AAAATACCAG CACCAGGAAA
  AAAAAAAGTG AAAAAAAAAA TTAAAAAAAA AAAAGAAAAA GAGCCGGCCA GGTGTGGTGG
  CGCACGCCTT TAATTCCAGC ACTCGGGAGG CAGAGGCAGG TGGATTTACT GAGTTTGAGG
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45171490	mCV24576675	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss146385495	ENSMUSSNP6311714	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32618198					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180549509 () rs orientation: forward

Symbol	Name	Function Class
Gm8101	predicted gene 8101	within coordinates
Gm70653	predicted gene, 70653	1498 bp downstream
Rr424550	regulatory region 424550	1201 bp distal
Rr424551	regulatory region 424551	1401 bp distal
Rr424552	regulatory region 424552	505 bp proximal