rs32618282 SNP Detail

Summary

• ID
  rs32618282
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:119770186 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAAGCACA TTATAGTATG
  GATAGCTGAG ATGTTTCATT GCATATTCCT CAATGGCTGA TGCTCACACT ATACAAGCTT
  CTTGCTAGAG TTTCTGCAGC CACTCTCTAG AGCAGTGGTT CTCAACCTTC CTAATGCTGG
  GACCTCTTCA TACGTTCCTC ATGTCCTGGT GACTAGTGGC CATAACATTA TTTTGTTGCT
  R
  TTTCATAAGT ATAGTTTTGC TACTTTTATG AGCTGTAACG TGAACGTTGG CTATGTGGGA
  TAGCCGATAA GTGGCTGGAA AGGTTCATGA CCCACAGGTT GAGATCCACT ACTCTAGCAG
  CATTCTTAAG ACTCAGTAGC TCTAGTTCTC TGTGTAGTGC CATGATGGGG CTGGACAGGA
  CAGATCAGGA AGAACGACAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45671047	mCV22643251	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss147338413	ENSMUSSNP5843290	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32618282					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:119770186 () rs orientation: forward

Symbol	Name	Function Class
Hivep3	human immunodeficiency virus type I enhancer binding protein 3	within coordinates
Rr91833	regulatory region 91833	986 bp distal
Rr91834	regulatory region 91834	1015 bp proximal
Rr91835	regulatory region 91835	1614 bp proximal
Rr96140	regulatory region 96140	1969 bp proximal
Rr102092	regulatory region 102092	386 bp distal
Tssr38760	transcription start site region 38760	1122 bp downstream