rs32618983 SNP Detail

Summary

• ID
  rs32618983
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:136515089 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCCGACCCT GGGAACTGAC ACATGGATGG
  CATGGGAGGG TCACTTTTGT GCTGCTGACC CCAACCCATA CTAGGAGCTA TGCTTGTAAG
  ACTGATTTAG TATCTGAGCT CTAAAGCCTT GTTTGAATTT TATTCTTTTA TTCTATTAAT
  K
  TAGAttttga aacagggtgt attgtgcaga ataagctagt ctcaaattaa taaccctctt
  acttcagtct cctgaatgct gggaGTGTGA TATACTATTT TTATATATAC ATTCTATAAG
  ATTAACTCAA GGTAATTACT GTCGTTTTAA                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss45170973	mCV24736719	ABI	CRAMUS_MOUSE	f	SNP		G					G	T
ss49503643	NES12859939	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G		T	G	G		G	G	T	G		G
ss145559100	ENSMUSSNP2413305	ENSEMBL	ENSEMBL_Sanger	f	SNP		G						T
ss319996215	CHEV_1_138483928	CHEVERUD	SCREENING_POP	f	SNP											T					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32618983					SNP	G	G	G	G	G	G	G	T	G	G	T	G	G	T	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49503643	NES12859939	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:136515089 () rs orientation: forward

Symbol	Name	Function Class
4933409D19Rik	RIKEN cDNA 4933409D19 gene	within coordinates
Gm57131	predicted gene, 57131	within coordinates
Rr419475	regulatory region 419475	454 bp proximal
Rr419476	regulatory region 419476	1335 bp proximal