rs32619320 SNP Detail

Summary

• ID
  rs32619320
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:88198117 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAA TGGTTCAGAA GGAGAAGGCA
  R
  GAAACTGTCT CTGCGGATGC TCTCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46168724	mCV24213078	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss145439817	ENSMUSSNP5392744	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32619320					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:88198117 () rs orientation: forward

Symbol	Name	Function Class
Cbln1	cerebellin 1 precursor protein	within coordinates
Cbln1os	cerebellin 1 precursor protein opposite strand	1323 bp upstream
Cpgi20770	CpG island 20770	1798 bp distal
Cpgi20771	CpG island 20771	221 bp distal
Cpgi20772	CpG island 20772	106 bp proximal
Rr666962	regulatory region 666962	887 bp proximal
Rr666963	regulatory region 666963	1012 bp proximal
Rr666964	regulatory region 666964	1465 bp proximal
Rr666965	regulatory region 666965	1551 bp proximal
Rr666966	regulatory region 666966	1839 bp proximal
Tssr2634	transcription start site region 2634	1037 bp downstream
Tssr78595	transcription start site region 78595	1282 bp upstream
Tssr78596	transcription start site region 78596	1294 bp upstream
Tssr78597	transcription start site region 78597	1316 bp upstream
Tssr78598	transcription start site region 78598	1349 bp upstream
Tssr78599	transcription start site region 78599	1377 bp upstream
Tssr78600	transcription start site region 78600	1400 bp upstream
Tssr78601	transcription start site region 78601	1407 bp upstream
Tssr78602	transcription start site region 78602	1664 bp upstream
Tssr78603	transcription start site region 78603	1761 bp upstream
Tssr78604	transcription start site region 78604	1890 bp upstream
Tssr78605	transcription start site region 78605	1918 bp upstream
Tssr82308	transcription start site region 82308	1567 bp upstream
Tssr82309	transcription start site region 82309	1380 bp upstream
Tssr82310	transcription start site region 82310	1187 bp upstream
Tssr82311	transcription start site region 82311	1028 bp upstream
Tssr82312	transcription start site region 82312	838 bp upstream
Tssr82313	transcription start site region 82313	812 bp upstream
Tssr82314	transcription start site region 82314	632 bp downstream
Tssr82315	transcription start site region 82315	672 bp downstream
Tssr82316	transcription start site region 82316	711 bp downstream
Tssr82317	transcription start site region 82317	876 bp downstream
Tssr82318	transcription start site region 82318	1054 bp downstream
Tssr82319	transcription start site region 82319	1087 bp downstream
Tssr82320	transcription start site region 82320	1114 bp downstream
Tssr82321	transcription start site region 82321	1126 bp downstream