rs32620681 SNP Detail

Summary

• ID
  rs32620681
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:83079397 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATTAGCAGAC CTCTTCTACG GCCTCTACAT CAGTTCCCAC
  CTTCAGGTTC CTGCCTGGCT TTGAGCTCCT GCCTTGGTTT CCCTCTGTGG ACTGTGATTC
  R
  GGATATGTGA GCCAAAGAAA CCCTTTCCTC TAAGAGTTTC TTTTGTTCAT GATGTTTCAT
  CCCAGAAAAA ATAACCATAA CTAAGACACC AAGCAATCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46168653	mCV24054920	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss145303236	ENSMUSSNP5701746	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss322735740	CHEV_8_84876667	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32620681					SNP	A	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:83079397 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Il15	interleukin 15			Intron
				Noncoding-Transcript-Variant
Rr382378	regulatory region 382378			1828 bp downstream
Rr400995	regulatory region 400995			1216 bp downstream
Rr666114	regulatory region 666114			1116 bp distal
Rr666115	regulatory region 666115			1323 bp distal
Tssr81943	transcription start site region 81943			640 bp downstream
Tssr81944	transcription start site region 81944			684 bp downstream
Tssr81945	transcription start site region 81945			727 bp downstream
Tssr81946	transcription start site region 81946			782 bp downstream
Tssr81947	transcription start site region 81947			1565 bp downstream