rs32621567 SNP Detail

Summary

• ID
  rs32621567
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135935102 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATGGCGGGT GAGTGGCAGC TGGAGAGATT AGGATTAGCG
  AGTCTGGGTC AGCCTCTGGT CTCTCAATGC TCCCCAGAAC GCGAACTGAA AGCCTTTAAA
  R
  CCCGGAAACC CAGCCAACTA TGAATGCAAT CTGAGGTAGG TAATCTCTGC GTGTGAAGTG
  ATTATGTGTA AAAACAGTGG ATTAGTGTGT CCGTGCAGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss45171821	mCV27553509	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss145550652	ENSMUSSNP2789269	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs32621567					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135935102 () rs orientation: forward

Symbol	Name	Function Class
Cpgi801	CpG island 801	64 bp proximal
Igfn1	immunoglobulin-like and fibronectin type III domain containing 1	1022 bp upstream
Rr28609	regulatory region 28609	within coordinates
Rr372097	regulatory region 372097	1133 bp upstream
Tmem9	transmembrane protein 9	855 bp upstream