rs32623358 SNP Detail

Summary

• ID
  rs32623358
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:152625728 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCCCATGAT TTGTGTTTAG ACAAAGTCAA
  ACACTCCCTC Tggggctggg aagatggctc agcagtcaca agcacttttg ctcttgcaca
  ggacctgagt ccagttccca ccacccaggt ggtggctcga caccgtttgt aactccagct
  Y
  caggagctca cacatactct tctagtttcc tcaggtactg cattcatata taaataagca
  gggcaaaact ctcatataaa ataaaTCTTT TCTTTAAATG TTACCAAAAa tagataggta
  gatagataga tagatagata gatagataga                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45171372	mCV23324858	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss145734718	ENSMUSSNP2231340	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
ss320067887	CHEV_1_154597107	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32623358					SNP	C	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:152625728 () rs orientation: forward

Symbol	Name	Function Class
Apobec4	apolipoprotein B mRNA editing enzyme catalytic polypeptide-like 4	574 bp upstream
Gm28792	predicted gene 28792	within coordinates
Rgl1	ral guanine nucleotide dissociation stimulator,-like 1	within coordinates
Rr31152	regulatory region 31152	within coordinates
Tssr9415	transcription start site region 9415	546 bp upstream
Tssr9416	transcription start site region 9416	550 bp upstream
Tssr9417	transcription start site region 9417	577 bp upstream