rs32623675 SNP Detail

Summary

• ID
  rs32623675
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:81151298 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGCTCTTTT TCAATTAATT
  TCTTTGTTAT GAAACTAGAC TTCTGTCTTG CCAGTTAAAA TTTGAAGAGT TGATTGGCCT
  GTTTCTGTGT TTTCTGTCGA CAGCAGTAGC CAGAGGTAAC TTTGAAACGG TAGAAGCCAG
  ATGTTCCGCT CCAATTTCAG AGGGCTGTAG ATCAGATTCT GTCCCGGACC TACACTTTAA
  R
  TACACATTCA TTAATAAGCA TCCACAAAGA GGATATAAAG CCAACACCCT AGGTTCAATC
  TCCATTATCA CTTTGAAAGA AAAATTCATT CCAGACAAAT GCAGAATATA CCAGTTTTAG
  TTTTCTTTTC CATCAAGAGT TGCATTGGAC ACCCCCCCCC CAAAAGTCCA TCAAACCAGA
  GAATTAAAGA GTCATACCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C3H/HeJ	CAST/EiJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46706230	NES10772992	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C3H/HeJ	CAST/EiJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32623675					SNP	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46706230	NES10772992	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:81151298 () rs orientation: forward

Symbol	Name	Function Class
Rr578700	regulatory region 578700	within coordinates