rs32625355 SNP Detail

Summary

• ID
  rs32625355
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:155924304 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCACG TCCCCCGCAG GCGCCATGGA
  R
  CTGCTGTCCC GCGTCCTGCT GTGGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45672401	mCV24238750	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss148117613	ENSMUSSNP2383144	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss321443273	CHEV_4_155213956	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32625355					SNP	A	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:155924304 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15490	CpG island 15490	965 bp proximal
Gm68629	predicted gene, 68629	within coordinates
Mxra8	matrix-remodelling associated 8	within coordinates
Mxra8os	matrix-remodelling associated 8, opposite strand	within coordinates
Rr398927	regulatory region 398927	1337 bp upstream
Rr606588	regulatory region 606588	1612 bp distal
Rr606589	regulatory region 606589	111 bp distal
Rr606590	regulatory region 606590	321 bp proximal
Rr606591	regulatory region 606591	1237 bp proximal
Rr606592	regulatory region 606592	1264 bp proximal
Rr606593	regulatory region 606593	1300 bp proximal
Tssr40724	transcription start site region 40724	163 bp downstream
Tssr40725	transcription start site region 40725	143 bp downstream
Tssr40726	transcription start site region 40726	85 bp downstream
Tssr40727	transcription start site region 40727	23 bp downstream
Tssr40728	transcription start site region 40728	7 bp downstream
Tssr40729	transcription start site region 40729	1254 bp upstream
Tssr40730	transcription start site region 40730	1274 bp upstream
Tssr40731	transcription start site region 40731	1299 bp upstream
Tssr40732	transcription start site region 40732	1321 bp upstream
Tssr40733	transcription start site region 40733	1565 bp upstream
Tssr44980	transcription start site region 44980	1181 bp downstream
Tssr44981	transcription start site region 44981	1247 bp downstream