rs32628270 SNP Detail

Summary

• ID
  rs32628270
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:120152158 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTTTTAAAC GAAGTTAAAT TCATTTGAAA GCAAAGTTAG
  GTTTTGACAG ATCCCGAGCT GCACTCAGCT CACTGAGTAC CATTGGCTAC TAGGCTGTGA
  Y
  AACTGAGCAC CAAAGTAGGT GTGGTTACAG AGTTGCTAGG CAACCGCTAA TCTTTCTCCA
  ATCCCAAACC ACAGAGCTTC TCAGTTGGGA TTCTGTGGGA                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss47191096	NES11570183	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs32628270					SNP	C	C	C	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47191096	NES11570183	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:120152158 () rs orientation: forward

Symbol	Name	Function Class
Gm32916	predicted gene, 32916	100 bp upstream
Rr654730	regulatory region 654730	within coordinates
Tssr68785	transcription start site region 68785	104 bp upstream
Tssr68786	transcription start site region 68786	125 bp upstream