rs32628999 SNP Detail

Summary

• ID
  rs32628999
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:134485127 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCTT GAAAGTTGGG AGAGAAGATG
  M
  CTAGGTCATA GTCAACTGAG AGACT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45172540	mCV23638931	ABI	CRAMUS_MOUSE	f	SNP	C	A	C
ss145508312	ENSMUSSNP245772	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss319983162	CHEV_1_136453966	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32628999					SNP	C	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:134485127 () rs orientation: forward

Symbol	Name	Function Class
Cpgi772	CpG island 772	329 bp distal
Gm57134	predicted gene, 57134	287 bp upstream
Rr367005	regulatory region 367005	129 bp downstream
Rr418945	regulatory region 418945	298 bp distal
Rr418946	regulatory region 418946	1398 bp distal
Rr418947	regulatory region 418947	955 bp distal
Rr418948	regulatory region 418948	within coordinates
Tssr13798	transcription start site region 13798	387 bp upstream