rs32629738 SNP Detail

Summary

• ID
  rs32629738
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:120153256 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGCATGGGA TAGTGAGAGA
  TGAGAGCTTC AGCAAGGGGT GGCAGCTGCC AGGGAAGATG TATTCGGGTA TGAAGTGATA
  ATGTCACTTT GGAAGGTCAC ACACACACAA CTGACATGCA AGCACATGCC CTTGTTCCAG
  CCAAAGCAAT GGCAACTTGT TATAAAAATT ATTTTCGTGC ATTTGAAATG TACATGCAAC
  S
  TTTTGTTTCC ATTACTTAGC TATAGCTCCA GTTCTCGGAG CAATCGTCTC TCCCTCGACT
  TACTCATAGC TTAAGTCTAT ATTAATACTG TATTTTGGCT TTTACAGAGT CTTGTTCTAA
  GAACTAGTAT ACAGTTTGTT CTGAAAGAAG TTACCCATAC ACTTGTTCTT TCCTGCGTAT
  CTTCTAGAAT GAACACTCAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47191114	NES11570192	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32629738					SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47191114	NES11570192	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:120153256 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm32916	predicted gene, 32916			Intron
				Noncoding-Transcript-Variant
Rr654730	regulatory region 654730			988 bp distal
Tssr68785	transcription start site region 68785			975 bp downstream
Tssr68786	transcription start site region 68786			959 bp downstream