rs32629743 SNP Detail

Summary

• ID
  rs32629743
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:120153436 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTGAAATG TACATGCAAC
  CTTTTGTTTC CATTACTTAG CTATAGCTCC AGTTCTCGGA GCAATCGTCT CTCCCTCGAC
  TTACTCATAG CTTAAGTCTA TATTAATACT GTATTTTGGC TTTTACAGAG TCTTGTTCTA
  AGAACTAGTA TACAGTTTGT TCTGAAAGAA GTTACCCATA CACTTGTTCT TTCCTGCGTA
  Y
  CTTCTAGAAT GAACACTCAT TAAAGTTTTA GTAAACATTT AGCATTACAA CAATCCTTGG
  GAAAAATGCA AATATGAATC CTGCTCAGGC AACATTTCTC ACTTCTATTA GAGCTTTTGT
  GTTAATATGC TTGAATTGCT ATTTCTACTA ACACTTAATG TCTTCCAAAG CAAGGGGAAT
  ATATTTATGG AGTTTATGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47191120	NES11570194	PERLEGEN	MM_PANEL2	f	SNP	T	C	T	T	C	T	T	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32629743					SNP	T	C	T	T	C	T	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47191120	NES11570194	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:120153436 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm32916	predicted gene, 32916			Intron
				Noncoding-Transcript-Variant
Rr654730	regulatory region 654730			1168 bp distal
Tssr68785	transcription start site region 68785			1155 bp downstream
Tssr68786	transcription start site region 68786			1139 bp downstream