rs32629966 SNP Detail

Summary

• ID
  rs32629966
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:84825006 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGCAGACCT GGGAGCAGGC AGTGACAGTT AGACAGAGAT
  CCTAGAGTGG GAACACTCAT GCCTCCTGCT GTGCCCCAGC CTCACCTCCA AGATGACTAT
  R
  TCATAGTCAC TGAAAGAGCA GAACTGGTGA CCCCAAGTGG CATCATGGCG GATGACCTCA
  TTGATGACAT ACTCGAAGTC CAGGGTAAGC TGCTCCACT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	LG/J	SM/J
ss46169771	mCV23392735	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss145371923	ENSMUSSNP7180368	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss322747572	CHEV_8_86622276	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	LG/J	SM/J
rs32629966					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84825006 () rs orientation: forward

Symbol	Name	Function Class
Dcaf15	DDB1 and CUL4 associated factor 15	Coding-Synonymous
Gm39210	predicted gene, 39210	within coordinates
Rfx1	regulatory factor X, 1 (influences HLA class II expression)	1385 bp downstream