rs32630374 SNP Detail

Summary

• ID
  rs32630374
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:35113950 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTAAGAACA TGCATGGATT
  TACTTTCAGG AGCCAGGGCA ATTGGATACA ATTCTTTAAA AATTAATATG GTGTGTGTGT
  GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GCCACAAGAG GATGTCCTTT GAGATAGGGT
  CTCTTACTGA ACACGAAGTC CTCCATTTTG GCACAACTGG CTAGCCATCA AACTCCTGGG
  K
  TATGCCTGTG TCCACCTCTC AATGCTAAGG TTACAGACAT GTGTGGCCAT TTCTGGCTCT
  TATGTGTGTG CTGGGGATTT GAACTCAGGT CCTCATGCTT GCATAGCAAA TATCCTTACC
  CACTGAGCCA AATTCTCCCC ATTCCCTAGG TGCAATCTTT GGTATAGCTG TGTATGTGTC
  TCCAGAGTAT TTGAGGTAGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss45172483	mCV24868736	ABI	CRAMUS_MOUSE	f	SNP	G	G	T					T		T
ss60718106	NES16346913	PERLEGEN	MM_PANEL2	f	SNP	G		T	T	T	G	T		T	T	T	T	T	T	T	T
ss148903674	ENSMUSSNP5519600	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T							T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32630374					SNP	G	G	T	T	T	G	T	T	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60718106	NES16346913	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:35113950 () rs orientation: forward

Symbol	Name	Function Class
D1Mit243	DNA segment, Chr 1, Massachusetts Institute of Technology 243	24 bp distal
Gm53547	predicted gene, 53547	within coordinates