rs32631326 SNP Detail

Summary

• ID
  rs32631326
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:120234280 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGTGAACT CGGTCACCAA
  GTTCGCGGTA CCGGGAAGAC TACAGTAAAA GTGGCGAGGG ACGACCTCCG AGGAACAGGG
  AGTGCCGACG ACTCCCGGAC TTGCGAGGAC TCACGGGCAG GCCCAAGACG GCTGGGGTGA
  CTGTGACGGC TGCAGACGCA GCTGGGATTA CAGGCTGCAT GTCTTTTGCA GAAAAAGAAC
  Y
  CAGAAAGGAT AACCTACAAA AGCTGCAATC TAGTCCGGGA GACCTCTAGC CTCTCCCCAG
  GAGCTGGGCT CGTCCCGCCT ACCGGAGCAG TAGAGCACTG CATGCGTAGA GGGCCGCCGG
  TACAAGGGGG CGTGGGCAAG CTCGCAGTGC ACACCGGGAA ACTCGGTCCT CCGACCCCAT
  CTTGCTTTGC TGTCTGCAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47191759	NES11592704	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32631326					SNP	T	T	T	T	C	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47191759	NES11592704	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:120234280 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19646	CpG island 19646	within coordinates
Gm45112	predicted gene 45112	171 bp upstream
Rr654736	regulatory region 654736	within coordinates
Rr654737	regulatory region 654737	130 bp proximal
Tssr68788	transcription start site region 68788	143 bp upstream
Uqcrc2	ubiquinol cytochrome c reductase core protein 2	132 bp upstream