TCACT GAGGGTGAGT GAAGCAAAGA R AATTTTATTT ATTTGGAGTG ACAAC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|---|
ss45672850 | mCV22883073 | ABI | CRAMUS_MOUSE | f | SNP | G | G | A | G | A | ||
ss146172200 | ENSMUSSNP5432086 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | A | A | ||||
ss321074784 | CHEV_4_34432284 | CHEVERUD | SCREENING_POP | f | SNP | G | A | |||||
SNP Consensus Information | ||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
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rs32631547 | SNP | G | G | A | G | A | G | A |
Location: Chr4:34485035 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm12350 | predicted gene 12350 | 797 bp upstream | ||||||
Gm33434 | predicted gene, 33434 | within coordinates | ||||||
Rr590219 | regulatory region 590219 | 660 bp proximal | ||||||
Tssr36763 | transcription start site region 36763 | 699 bp upstream | ||||||
Tssr36764 | transcription start site region 36764 | 734 bp upstream | ||||||
Tssr36765 | transcription start site region 36765 | 747 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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