rs32633078 SNP Detail

Summary

• ID
  rs32633078
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:4027768 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAAG AAGAGGCTCC TCAAGAAATG
  R
  TAGTGGCACC TAAATGATGG TAAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss49379114	NES12542369	PERLEGEN	MM_PANEL2	f	SNP		A	A	A	G	G	G	G		G	G	A
ss147038970	ENSMUSSNP5452115	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A			G				G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs32633078					SNP	G	A	A	A	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49379114	NES12542369	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:4027768 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6911	CpG island 6911	1993 bp distal
Gm2093	predicted gene 2093	within coordinates
Rr369897	regulatory region 369897	1334 bp downstream
Rr498630	regulatory region 498630	1445 bp distal