rs32633634 SNP Detail

Summary

• ID
  rs32633634
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:75103258 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCC ACACTCAGGC CCTGCCCAGA
  W
  TCCTTTCTCA GCACCATGTT TTCTA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45173297	mCV25280843	ABI	CRAMUS_MOUSE	f	SNP	T	A	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32633634					SNP	T	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:75103258 () rs orientation: forward

Symbol	Name	Function Class
Cpgi409	CpG island 409	1244 bp distal
Nhej1	non-homologous end joining factor 1	1388 bp upstream
Rr29642	regulatory region 29642	657 bp distal
Rr371532	regulatory region 371532	707 bp downstream
Slc23a3	solute carrier family 23 (nucleobase transporters), member 3	within coordinates
Tssr7483	transcription start site region 7483	1936 bp upstream
Tssr12335	transcription start site region 12335	1664 bp upstream
Tssr12336	transcription start site region 12336	1404 bp upstream
Tssr12337	transcription start site region 12337	1359 bp upstream
Tssr12338	transcription start site region 12338	1963 bp downstream
Tssr12339	transcription start site region 12339	1987 bp downstream