rs32635352 SNP Detail

Summary

• ID
  rs32635352
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:4266375 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCAG ACGCCTGGGG CTCGCTCCAC
  Y
  AGGGACCTTC GCCCCATAGC TCCGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46170675	mCV23159920	ABI	CRAMUS_MOUSE	f	SNP	T	C						C
ss61075548	NES16047928	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	C	C	C	C	C	C	C	C	C	C	T	C
ss148555653	ENSMUSSNP1090430	ENSEMBL	ENSEMBL_Sanger	f	SNP		C						C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32635352					SNP	T	C	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61075548	NES16047928	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:4266375 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20045	CpG island 20045	1420 bp distal
Cpgi20046	CpG island 20046	within coordinates
Gm64374	predicted gene, 64374	837 bp downstream
Prr36	proline rich 36	within coordinates
Rr658993	regulatory region 658993	927 bp proximal
Tssr80249	transcription start site region 80249	1995 bp upstream
Tssr80250	transcription start site region 80250	1890 bp upstream
Tssr80251	transcription start site region 80251	1792 bp upstream
Tssr80252	transcription start site region 80252	1751 bp upstream
Tssr80253	transcription start site region 80253	1645 bp upstream
Tssr80254	transcription start site region 80254	1585 bp upstream
Tssr80255	transcription start site region 80255	364 bp upstream
Tssr80256	transcription start site region 80256	604 bp downstream
Tssr80257	transcription start site region 80257	643 bp downstream
Tssr80258	transcription start site region 80258	738 bp downstream
Tssr80259	transcription start site region 80259	758 bp downstream
Tssr80260	transcription start site region 80260	804 bp downstream
Tssr80261	transcription start site region 80261	886 bp downstream
Tssr80262	transcription start site region 80262	1091 bp downstream