rs32636909 SNP Detail

Summary

• ID
  rs32636909
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:79213340 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTATCTTC CTGGATCAGT
  TTCCCAAGGT CTGGAATTAG AGTTACGCAC TACTATGCTT GGCTTTGTTT GTTTGTTTGT
  TTGTTTTTGT TTTTTCCCGA GACATATGCT TGGCTTTATT TCTGTTTTGA AGTGAAGGAA
  GATTTTATAT TTGGCCTATG CAGAGATTCA AGAAAGGCAT TATATGTCTT ATTGTTATTT
  Y
  ATTGTATCAT TAAAAAGTTC AAAGCTCTGC TGGGTGTGAT CCCAGCACTC AGGGGGCAGA
  AGCAGTGGAT CTCTATGAGT TCAAGGCCAG TCTGGCCTAT TCAGGAAGTT CTAGGCACGG
  CGGGGTTACA TATTGAGACC CTTTCAAAAA AGAAAGAAAG AAAGGCAGGC CAGGGGCTTT
  ATGCTATTTT GTTCCTATGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46171702	mCV23381336	ABI	CRAMUS_MOUSE	f	SNP		T	C						C
ss52474188	NES15653464	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	C	C	C	C	C		T	C	C	T		C
ss145236372	ENSMUSSNP4967793	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
ss322720231	CHEV_8_81010610	CHEVERUD	SCREENING_POP	f	SNP											T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32636909					SNP	C	T	C	C	C	C	C	C	C	C	T	T	C	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52474188	NES15653464	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:79213340 () rs orientation: forward

Symbol	Name	Function Class
Gm2225	predicted gene 2225	301 bp upstream