rs32637566 SNP Detail

Summary

• ID
  rs32637566
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:179346617 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTAGAGTT ATGTTTGTTG
  AACCCTTTGA AATAATGTTG CAGTCAGGTC TTGAACTCAG AAACCCTTTA TTCTCTTCCT
  CCTGAGTTCT TGGATTATGG ATATACAAGC AAAGGATTAT GGGTATACAA TGAACAAGCA
  AAGGAGTAGG CACAAGACTG CCTAGGAGGG TCAGCATGAT CAACCAGTTC TGATGCTCAG
  W
  CTCAGCTATA TGAGACCTAT ATCAGACCAC ACAAAGCTTT TTAAAGACAG CGTCTATTGT
  GTATCTCTGG CTGTCCTGGA ACTCTCTGTG TAGATCAGGC TGGCCTTGAA CTCATAGACA
  TCCTGCCTCT GCCTTTCCTG TATACACGTC TGTGTGCCTT CTGGGAACCC CAGCAAACAC
  ACAAGTGGAA GACTAGCCTC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	WSB/EiJ
ss46707512	NES10668759	PERLEGEN	MM_PANEL2	f	SNP	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	WSB/EiJ
rs32637566					SNP	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46707512	NES10668759	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:179346617 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1095	CpG island 1095	909 bp distal
Gm5561	predicted gene 5561	1326 bp downstream
Rr396646	regulatory region 396646	890 bp downstream
Rr424271	regulatory region 424271	599 bp distal
Rr424272	regulatory region 424272	992 bp distal
Smyd3	SET and MYND domain containing 3	1011 bp upstream
Tssr15501	transcription start site region 15501	1063 bp upstream
Tssr15502	transcription start site region 15502	1026 bp upstream
Tssr15503	transcription start site region 15503	1007 bp upstream