rs32637608 SNP Detail

Summary

• ID
  rs32637608
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:140428008 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTT CTGCCAGGTC AGATTCTTTA
  M
  AATTTTAAAA CTCAGCTCTC CCAGG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45674207	mCV23725076	ABI	CRAMUS_MOUSE	f	SNP	C	C	A
ss147709721	ENSMUSSNP1241194	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32637608					SNP	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:140428008 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15194	CpG island 15194	718 bp distal
Cpgi15195	CpG island 15195	368 bp proximal
Gm69527	predicted gene, 69527	within coordinates
Gm69529	predicted gene, 69529	227 bp downstream
Rcc2	regulator of chromosome condensation 2	within coordinates
Rr377298	regulatory region 377298	within coordinates
Rr603517	regulatory region 603517	814 bp distal
Rr603518	regulatory region 603518	146 bp distal
Rr603519	regulatory region 603519	within coordinates
Rr603520	regulatory region 603520	563 bp proximal
Rr603521	regulatory region 603521	713 bp proximal
Tssr39970	transcription start site region 39970	815 bp downstream
Tssr39971	transcription start site region 39971	742 bp downstream
Tssr39972	transcription start site region 39972	722 bp downstream
Tssr39973	transcription start site region 39973	699 bp downstream
Tssr39974	transcription start site region 39974	351 bp downstream
Tssr39975	transcription start site region 39975	212 bp downstream
Tssr39976	transcription start site region 39976	168 bp downstream
Tssr39977	transcription start site region 39977	84 bp downstream
Tssr39978	transcription start site region 39978	729 bp upstream
Tssr39979	transcription start site region 39979	750 bp upstream
Tssr39980	transcription start site region 39980	769 bp upstream
Tssr39981	transcription start site region 39981	813 bp upstream
Tssr39982	transcription start site region 39982	825 bp upstream
Tssr39983	transcription start site region 39983	911 bp upstream
Tssr39984	transcription start site region 39984	1136 bp upstream
Tssr39985	transcription start site region 39985	1198 bp upstream
Tssr39986	transcription start site region 39986	1239 bp upstream
Tssr39987	transcription start site region 39987	1384 bp upstream
Tssr39988	transcription start site region 39988	1480 bp upstream
Tssr39989	transcription start site region 39989	1519 bp upstream
Tssr44270	transcription start site region 44270	1047 bp upstream
Tssr44271	transcription start site region 44271	1014 bp upstream
Tssr44272	transcription start site region 44272	874 bp upstream
Tssr44273	transcription start site region 44273	372 bp downstream
Tssr44274	transcription start site region 44274	1701 bp downstream