rs32640038 SNP Detail

Summary

• ID
  rs32640038
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:139409609 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTT AAAATGTTAA TTGAATAAGT
  W
  ATAGTTGTCA CAATCACCAG GTTTC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss45173980	mCV23214859	ABI	CRAMUS_MOUSE	f	SNP	A	A	T				A	A
ss60809602	NES16481637	PERLEGEN	MM_PANEL2	f	SNP	A		T	A	A	A		A	T	A	A	A	T
ss145588300	ENSMUSSNP1180338	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	T					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32640038					SNP	A	A	T	A	A	A	A	A	T	A	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60809602	NES16481637	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:139409609 () rs orientation: forward

Symbol	Name	Function Class
Aspm	abnormal spindle microtubule assembly	within coordinates
Tssr235	transcription start site region 235	1651 bp upstream