rs32644471 SNP Detail

Summary

• ID
  rs32644471
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:181340252 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAT CTAAATATAA GAAGACACAA
  W
  GCCCATGTTG GGTAATAGCT CTGCT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45174141	mCV25244195	ABI	CRAMUS_MOUSE	f	SNP	T	A	T	A
ss146396667	ENSMUSSNP839478	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		A
ss320161710	CHEV_1_183442818	CHEVERUD	SCREENING_POP	f	SNP					T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32644471					SNP	T	A	T	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:181340252 () rs orientation: forward

Symbol	Name	Function Class
Ccdc121rt1	coiled-coil domain containing 121, retrogene 1	1236 bp upstream
Cpgi1136	CpG island 1136	1823 bp distal
Rr424762	regulatory region 424762	1093 bp distal
Rr424763	regulatory region 424763	1182 bp distal
Rr424764	regulatory region 424764	within coordinates