rs32650704 SNP Detail

Summary

• ID
  rs32650704
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:139481611 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGATG GTACAGAGCC CTAGGGACCT
  Y
  TGGCAAAAAG TCCCTCTGTG CCACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45675161	mCV25306957	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss147680318	ENSMUSSNP5087479	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
ss321384133	CHEV_4_139310215	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32650704					SNP	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:139481611 () rs orientation: forward

Symbol	Name	Function Class
Pax7	paired box 7	within coordinates
Rr86808	regulatory region 86808	811 bp distal
Rr92760	regulatory region 92760	390 bp proximal
Rr92761	regulatory region 92761	1190 bp proximal
Rr103267	regulatory region 103267	211 bp distal
Rr103268	regulatory region 103268	within coordinates
Rr103269	regulatory region 103269	1991 bp proximal