rs32651352 SNP Detail

Summary

• ID
  rs32651352
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:80630935 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTCCTGGT TTCCACATTT
  CACGGTTTCA CCTTCATTCT CTGTCTCCCC AGGACACCTG TTATAGCTGG AGGAATCTTC
  GTGATTGACA AGTCCTGGTT TAACCATCTG GGAAAGTATG ATGCCCAGAT GGACATCTGG
  GGAGGAGAGA ATTTTGGTGA GTCAATCAAC AAACCATAGT GAAAACACAA GAACAATACC
  R
  AAGCTCAGAC GGAGCAGTCT ATATGTCAGG CCCTGGCCTT AAAGATACAT TGTTTTAAGT
  CATTTAATCA TCATAAGGGC CCTTTGAGGT AATTGTCTCC ATTTTCCTGA TTAAAAAATA
  GGCACAGAGA GTGATCTGTT AAGTTAGATG AAAAAGTTTA GGTATCCAGG GGAGCCTGTG
  ACCAAATGGC TAAATGTGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47194632	NES11226246	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32651352					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47194632	NES11226246	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:80630935 () rs orientation: forward

Symbol	Name	Function Class
4933406B15Rik	RIKEN cDNA 4933406B15 gene	within coordinates
Galnt16	polypeptide N-acetylgalactosaminyltransferase 16	within coordinates
Rr257781	regulatory region 257781	866 bp proximal
Rr261567	regulatory region 261567	1065 bp proximal
Rr261568	regulatory region 261568	1466 bp proximal