rs32652811 SNP Detail

Summary

• ID
  rs32652811
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161628094 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCAAAGAGCC ACAGAGAAGA ATTCAAATCT CCAATATCCC
  AACATCAAGG CCACATACTG CCCACAGGAA TTCCAAGAAC CTTGCCTGGA TGGAGATAGG
  Y
  CTCAAACTAC ATGCAATTTT GCTTCTCTTC TGAAAATATA GGAAATAATT TTGTTCTGAT
  AACTGGCTTT AGAAACTTAC ATATTTTCCT TAGTTAACA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45176292	mCV24536340	ABI	CRAMUS_MOUSE	f	SNP	C	C	C						T
ss60335598	NES15842408	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	T	C	C	C		C	C	T	C	C	T	C
ss145922772	ENSMUSSNP3841531	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C						T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32652811					SNP	C	C	C	C	T	C	C	C	T	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60335598	NES15842408	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161628094 () rs orientation: forward

Symbol	Name	Function Class
Rr421849	regulatory region 421849	1259 bp distal
Rr421850	regulatory region 421850	418 bp distal
Rr421851	regulatory region 421851	869 bp proximal