rs32654344 SNP Detail

Summary

• ID
  rs32654344
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150882659 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTATTTAA TTTTAGCTAA
  GTTTCAGATA GCAGGGCCTT GGGAGAAATT TTTCCTGTCC CTTGGCTAAA AACTTCAAGT
  ATTTCATTTA TTTAGCCAAT AACCATTGGG GTGGGGGTGG GGGGGAGACT ACAAAGGTAA
  ATGCAGAGTA TGTTTTCTGA GGTTGTTAAA TTGTAACATC AATATTTTTA CTTTTTAAGT
  R
  AAATGTTACT GATTTCTAAC AGCCCGTTGG TTTAAACTCA ACACTCTGGT TTTGTTTCAG
  CTTCTGGCTT TAAATTGAAA CAAACAAATA AACAAACAAC CCCAAAAAAT AAAAACAAAA
  CCCTAGGTCT CTGGGTAGAT TATTGCAGAG GACAGCAGAT TGGAGGAGGT GACCCTGCTT
  TGTATGATGC CTTAACGGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45676185	mCV24824490	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32654344					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150882659 () rs orientation: forward

Symbol	Name	Function Class
Gm36806	predicted gene, 36806	within coordinates
Gm69570	predicted gene, 69570	within coordinates
Gm69574	predicted gene, 69574	220 bp upstream
Gm69578	predicted gene, 69578	929 bp downstream
Mir12196	microRNA 12196	250 bp upstream
Rr398884	regulatory region 398884	595 bp upstream
Rr398885	regulatory region 398885	1380 bp upstream
Rr605416	regulatory region 605416	701 bp proximal
Rr605417	regulatory region 605417	1242 bp proximal
Rr605418	regulatory region 605418	1505 bp proximal
Tssr1385	transcription start site region 1385	245 bp upstream
Tssr1386	transcription start site region 1386	1389 bp downstream