rs32655783 SNP Detail

Summary

• ID
  rs32655783
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:71061985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGCG TCGGGAAGCA TCCAGGCTAA
  R
  GCTTGCTATC GCTGCAAGTG TCCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46173364	mCV22785569	ABI	CRAMUS_MOUSE	f	SNP	A	G					G	A
ss60632753	NES16282202	PERLEGEN	MM_PANEL2	f	SNP		G	A	A	G	A		A	A	A		G	G	A	G		A
ss145127922	ENSMUSSNP6824569	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G						A
ss322700618	CHEV_8_73133234	CHEVERUD	SCREENING_POP	f	SNP											A					A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32655783					SNP	A	G	A	A	G	A	G	A	A	A	A	G	G	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60632753	NES16282202	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:71061985 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20475	CpG island 20475	568 bp distal
Cpgi20476	CpG island 20476	within coordinates
Cpgi20477	CpG island 20477	1577 bp proximal
Gm45546	predicted gene 45546	1090 bp upstream
Gm63790	predicted gene, 63790	1058 bp upstream
Rr400904	regulatory region 400904	1509 bp upstream
Rr664832	regulatory region 664832	1032 bp distal
Rr664833	regulatory region 664833	531 bp distal
Rr664834	regulatory region 664834	883 bp distal
Rr664835	regulatory region 664835	within coordinates
Rr664836	regulatory region 664836	568 bp proximal
Rr664837	regulatory region 664837	1069 bp proximal
Rr664838	regulatory region 664838	1594 bp proximal
Ssbp4	single stranded DNA binding protein 4	901 bp upstream
Tssr77777	transcription start site region 77777	1055 bp upstream
Tssr77778	transcription start site region 77778	1364 bp upstream
Tssr81636	transcription start site region 81636	1005 bp upstream