rs32656563 SNP Detail

Summary

• ID
  rs32656563
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:165158184 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGCCTCCAG CCCCAATATA AGCTTTCAAT TTGGCGTCAA
  AAGGTAATGA AGAATGAAAA CATAATACAG TATATACAAT ACCATATAAT TTTAAACATA
  S
  AAGACCTTGA TATATTACAT TCTCTTGCAG TGGTTTTCAA ACAAGGTGTC TTGGAGGCTA
  AGTTTTAACT AAGGGGACCT GGAAGGGGAT GCAAGAGAG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss45176358	mCV23373756	ABI	CRAMUS_MOUSE	f	SNP		C	C					C		G
ss51401410	NES14455599	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	C	C		G	G	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32656563					SNP	C	C	C	C	C	C	C	C	G	G	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51401410	NES14455599	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:165158184 () rs orientation: forward

Symbol	Name	Function Class
Dcaf6	DDB1 and CUL4 associated factor 6	within coordinates
Rr20301	regulatory region 20301	1583 bp distal
Rr25486	regulatory region 25486	748 bp distal
Rr25487	regulatory region 25487	within coordinates
Tssr14767	transcription start site region 14767	799 bp upstream