rs32656906 SNP Detail

Summary

• ID
  rs32656906
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45863972 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAACCTTGGT GACTTAGAAC
  TCACTATGTA GACTAAGCTG GCTTTGAACT CAAGAAACCC ACCTGACTCC CAAATGCTAG
  GATCAAAGGC ATGTGTGACC ACGTCAGGCT GAGGGACCCC ATTTTGATAA GGGATTTTAC
  CTGGGGCTGG GCTGCAGTGG TATTAAAAGT AAACAGCTCT CCAGTCCTAC AGGGAAGAGA
  R
  GAACCCTACA ATTACGCTCA GCACTTGGGA AGAAGGCAGA GGCTGTGAGG TCCCCTCTCT
  CTTACCCTCA ATACCTGAGC ACAAAATTGT CCACACGGTT GACTCGGAGC TGGTAAGTGG
  TATTGACGGG TGACAGGGTA GACACGTCCA CATAGAAAAA CTGGATCTCA GACTCATTCT
  TGGTGGGGGG CTGACACAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47695016	NES11323107	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32656906					SNP	G	G	G	G	G	A	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47695016	NES11323107	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45863972 () rs orientation: forward

Symbol	Name	Function Class
A830035O19Rik	RIKEN cDNA A830035O19 gene	1427 bp upstream
Cpgi21698	CpG island 21698	1759 bp proximal
Gm68914	predicted gene, 68914	1422 bp downstream
Rr678012	regulatory region 678012	937 bp proximal
Sidt2	SID1 transmembrane family, member 2	within coordinates
Tssr89292	transcription start site region 89292	185 bp downstream
Tssr89293	transcription start site region 89293	999 bp downstream