TCAGC ACTGACTGCT CTTCTGGAGG Y CCTGAGTTCA AATCCCAGCT ACCAC Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss45676084 | mCV24954216 | ABI | CRAMUS_MOUSE | f | SNP | T | C | C | T | ||
ss148031276 | ENSMUSSNP3748097 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | T | ||||
ss321425397 | CHEV_4_148701123 | CHEVERUD | SCREENING_POP | f | SNP | T | C | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs32657281 | SNP | T | C | C | T | T | C |
Location: Chr4:149411471 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr604888 | regulatory region 604888 | 1880 bp distal | ||||||
Rr604889 | regulatory region 604889 | 1361 bp distal | ||||||
Rr604890 | regulatory region 604890 | 874 bp distal | ||||||
Rr604891 | regulatory region 604891 | 213 bp proximal | ||||||
Ube4b | ubiquitination factor E4B | 1402 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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