rs32657814 SNP Detail

Summary

• ID
  rs32657814
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134072061 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACTCATATCT GTCTGTTTCT GCTTCTAGAG TGTTGGGATT AACGATATGT GACAGCACAA
  CCACCATTAT TTATTTGTTT GTTTGTTCGT TTGTTTATTA TTTTTCGAGA CAGGGTTTCT
  CTGTGTAACC CTGGGTGTTA TAACTCCCTT AGACCAGACT GGCTTCGAAC TCAGAGACCT
  GCCTGTCTCT GCCTTTCATG TGCCTCTACC ACCGGGCTAA TTTTTTTTTT TAAGGCAATC
  ACTTGGCATG GCTCTGTAGT TAAGAGCACT GGCTGCTCTT CCAGGGGACC TGGCCCTGCT
  Y
  CCCCCCCCCC CGCACCTATG TGAGGGCTCT GTCATCTGTT ACTCTATCTA GCCCCAGGGA
  GTCGGATGCC CTCTTGTGGC TTCTGTGGGC ACCAGGCATA TGGTATACAT ACATACATGT
  AAGCAAAAGA CATACACTTA GGTTAATAAT AAAAGAGATA AGAAGAGCCC CTACTGAGGC
  CCTTATTTTG CTTTCCTGTC CCTAGGTGAA CTTGATTTTC TGTGAATAAG ATCTGAGATA
  AACAGCTGAG GTGCATATTT AACATAACAA AGTGAACCAG GCCTCCAGGT TCTCCCAGCC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45676534	mCV22575305	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32657814					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134072061 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15035	CpG island 15035	962 bp distal
Rr601645	regulatory region 601645	1031 bp distal
Rr601646	regulatory region 601646	57 bp proximal
Slc30a2	solute carrier family 30 (zinc transporter), member 2	within coordinates
Tssr39548	transcription start site region 39548	1596 bp downstream
Tssr39549	transcription start site region 39549	1539 bp downstream
Tssr39550	transcription start site region 39550	1244 bp downstream
Tssr39551	transcription start site region 39551	1215 bp downstream
Tssr39552	transcription start site region 39552	1142 bp downstream
Tssr39553	transcription start site region 39553	1070 bp downstream
Tssr39554	transcription start site region 39554	1046 bp downstream
Tssr39555	transcription start site region 39555	841 bp downstream
Tssr39556	transcription start site region 39556	726 bp downstream