rs32658209 SNP Detail

Summary

• ID
  rs32658209
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:135279853 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGTA AAAATGGAGA ATAAAATGGC
  Y
  GTCAGCTCCT CCCCCGTCTC CCACT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45176463	mCV23631408	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	T
ss145531685	ENSMUSSNP5495964	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss319989344	CHEV_1_137248692	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32658209					SNP	T	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:135279853 () rs orientation: forward

Symbol	Name	Function Class
Gm56137	predicted gene, 56137	1602 bp downstream
Lmod1	leiomodin 1 (smooth muscle)	within coordinates
Rr35730	regulatory region 35730	within coordinates