rs32658890 SNP Detail

Summary

• ID
  rs32658890
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:15075483 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAGT GGCAGAGTGG CTGGAGTTGC
  Y
  GGGTGTGGGT GGGCATGCTT CACCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46174092	mCV25207385	ABI	CRAMUS_MOUSE	f	SNP		C	T	C
ss148695657	ENSMUSSNP4314724	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss322517329	CHEV_8_15025483	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32658890					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:15075483 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20129	CpG island 20129	1765 bp proximal
Gm37844	predicted gene, 37844	within coordinates
Kbtbd11	kelch repeat and BTB (POZ) domain containing 11	within coordinates
Rr660167	regulatory region 660167	1926 bp distal
Rr660168	regulatory region 660168	827 bp proximal
Rr660169	regulatory region 660169	1921 bp proximal
Tssr76486	transcription start site region 76486	1684 bp upstream
Tssr76487	transcription start site region 76487	1703 bp upstream
Tssr76488	transcription start site region 76488	1816 bp upstream
Tssr76489	transcription start site region 76489	1899 bp upstream