rs32661185 SNP Detail

Summary

• ID
  rs32661185
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:115874615 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCGAGGAGG GGGCGATTCT GTTCCGGGGC TCACATCTGC
  GCTGCCTGCC AGCCGGCCCT CTGGCGTCCG GGCAGTTGAA GTCGCAGCCT TGCCCACGCC
  R
  TGCTCCCCAC GCCAGCCCAC CCCAGCCCCG GCGCCCGCCT TCACCTGCAG CCGGAAGCGC
  TGCACCGCCT TGTCCATGGT CTCCAGGCCG GCTCGCTGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss45676384	mCV25138409	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss147277441	ENSMUSSNP1728701	ENSEMBL	ENSEMBL_Sanger	f	SNP		G
ss321276771	CHEV_4_115690023	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs32661185					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:115874615 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14625	CpG island 14625	within coordinates
Faah	fatty acid amide hydrolase	within coordinates
Rr99792	regulatory region 99792	within coordinates
Tssr38488	transcription start site region 38488	1606 bp downstream
Tssr38489	transcription start site region 38489	135 bp downstream
Tssr42842	transcription start site region 42842	238 bp downstream
Tssr42843	transcription start site region 42843	436 bp downstream
Tssr42844	transcription start site region 42844	605 bp downstream
Tssr42845	transcription start site region 42845	624 bp downstream
Tssr42846	transcription start site region 42846	669 bp downstream
Tssr42847	transcription start site region 42847	702 bp downstream
Tssr42848	transcription start site region 42848	718 bp downstream
Tssr42849	transcription start site region 42849	735 bp downstream