rs32661852 SNP Detail

Summary

• ID
  rs32661852
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:66901031 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCCC CTGGCCTCTG CCTCCAGTGT
  K
  TGTGGAGGGG GAATTACAGG CCTGG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45176680	mCV23098106	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
ss144520311	ENSMUSSNP1237202	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss319758727	CHEV_1_66908446	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32661852					SNP	T	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:66901031 () rs orientation: forward

Symbol	Name	Function Class
Acadl	acyl-Coenzyme A dehydrogenase, long-chain	Intron
Cpgi339	CpG island 339	829 bp proximal
Rr412477	regulatory region 412477	within coordinates
Rr412478	regulatory region 412478	378 bp proximal
Rr412479	regulatory region 412479	1395 bp proximal
Tssr12011	transcription start site region 12011	1382 bp downstream
Tssr12012	transcription start site region 12012	1393 bp downstream
Tssr12013	transcription start site region 12013	1423 bp downstream
Tssr12014	transcription start site region 12014	1428 bp downstream
Tssr12015	transcription start site region 12015	1445 bp downstream
Tssr12016	transcription start site region 12016	1469 bp downstream