rs32662101 SNP Detail

Summary

• ID
  rs32662101
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:102615715 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCATCCCT GTTGTTAATC
  TTCATTAAAA TAATTTGCTA ATCACACACA CACACACACA CACACACACA CACACACACA
  CACACACACA CATCCTTTAT TCAATAACCC ACCACAGTTT TTAGAGCCAA TCAACTTGCC
  CTTAAGACAA GTGTTACTTT GTAATCTCTT CCTTTTAAAA CTCTACGGCC TCATAGGCCT
  M
  GGGAAAAAGC CACGAGCATG TATAGCTCTC AGGAGACTTT AATGTTTAAA TGCAGAAGCC
  ACAGAAAGAT GGATCCTTGT GGGAAAACAA TGAGGCTTTT AAAAATTATT ATTATTGCTA
  TTATCATTAA TTATTATTAT AAAACTCTTG TAAGTTACTA AGAAGCTGAG TTGCTTTTTG
  ATTTTGACTA ATTCATCTCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45677335	mCV23032817	ABI	CRAMUS_MOUSE	f	SNP	C	A	C	C
ss147134460	ENSMUSSNP5895256	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32662101					SNP	C	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:102615715 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14509	CpG island 14509	585 bp proximal
Cpgi14510	CpG island 14510	1526 bp proximal
Rr596308	regulatory region 596308	1127 bp proximal
Sgip1	SH3-domain GRB2-like (endophilin) interacting protein 1	636 bp upstream
Tssr38069	transcription start site region 38069	1646 bp upstream
Tssr38070	transcription start site region 38070	1753 bp upstream
Tssr38071	transcription start site region 38071	1776 bp upstream