rs32665864 SNP Detail

Summary

• ID
  rs32665864
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:46040433 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCAAGTGTT TCTTCCTCTT
  ACCTTTAAAC GGCGGTGTTT ATGCTTATTT TACACTATAC AGTGTTTAAA GAAACACTTC
  ATTTCAAAGA AATTAGTGCA TTAAAATCTC AGAATAATAT TGTATATCAA GACAATAGTG
  TAGGCTTTTA GTACATATGA TAATTACAAG CCAATCAGTA ACTTTGGAGG TAATGGTTCC
  W
  TATCAAGACA CTGATTTTCC TCCATGAAGA AATCTAATAG AAGGCAATCA TGGAAATCTA
  TGTGTATCTT AGACTAGGAG AATGCAGGCT GTGAAGTCCG TACCGGAGTA TAGCAGTGCT
  ATAGAGAGCA CAGACATCTT CCTGGTTTAA TGAGTCCACA GAGTGGAGAA TAGAAGAATG
  CCAGAGACTG GGAGAGAGAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47696270	NES11312225	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32665864					SNP	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47696270	NES11312225	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:46040433 () rs orientation: forward

Symbol	Name	Function Class
Rr678057	regulatory region 678057	1451 bp distal
Sik3	SIK family kinase 3	within coordinates
Tssr84829	transcription start site region 84829	1898 bp downstream